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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pp3c1_27710V3.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
ERF |
Protein Properties |
Length: 562aa MW: 60778.1 Da PI: 4.3851 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c1_27710V3.2.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.4 | 5.5e-21 | 247 | 296 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdps+ r +lg+++tae+Aa+a+++a+++++g
Pp3c1_27710V3.2.p 247 KYRGVRQRP-WGKWAAEIRDPSK---GVRLWLGTYDTAEQAARAYDKAAREIRG 296
8********.**********965...4*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042991 | Biological Process | transcription factor import into nucleus |
GO:0048364 | Biological Process | root development |
GO:0048825 | Biological Process | cotyledon development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
Sequence ? help Back to Top |
Protein Sequence Length: 562 aa
Download sequence Send
to blast |
MVGLRKDRSR GDIDVGMAKL QGVMGESEGC GGKTLKREFV SSDEELEEEQ EEGCSQRSRK 60 SQMLPKRVRV ICTDPDATDS SSDEEGSFRQ SHVVMRSSQR VLVQEIDMFR AGPELMAMAK 120 SSSSSSSSDS EFDETEECEV PSYHQVFTAQ TMQCSLNSAC SVDGEAGSFY EKPLWKTMKK 180 AKVPGKTMRK TTGAPSAVIS KLMNNKSGVS MLHASRSAAT MSTAKPPVPT KPAKAAMALT 240 KDIKQQKYRG VRQRPWGKWA AEIRDPSKGV RLWLGTYDTA EQAARAYDKA AREIRGPQAH 300 TNFSQADQSD VSGSVPTVSE THVAMQRNAQ SAAKLKSSSK RGQVVAEAAS NCKPLRALQV 360 GRIANSKEES CLSFGDMPSE VLGACQSLEE DLLDDDTFFD NLSEDNEFCM SDSLGGSEES 420 LCTSQTTSMP SSSSKSEAQS QPSPRDVLEA ARNSFAAVSE NSLESDSELS ESITDNNGVC 480 EVQSGCELDE VFLSDDLFFD FPDCEDANAA SNASDILDFA VGFDFGDDIG DFEFGAAESD 540 SLDWFSNAAD MPIPCVNPQF S*
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