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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pp3c1_27440V3.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
ERF |
Protein Properties |
Length: 220aa MW: 24289.9 Da PI: 7.0842 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c1_27440V3.1.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59 | 1.2e-18 | 6 | 55 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+Wv+eIr+p + +r++lg+f tae+Aa a+++a++ + g
Pp3c1_27440V3.1.p 6 KYRGVRQRH-WGSWVSEIRHP-----QlkTRVWLGTFETAEDAAHAYDEAARLMCG 55
8*******9.**********9.....445**********************87765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MGRPQKYRGV RQRHWGSWVS EIRHPQLKTR VWLGTFETAE DAAHAYDEAA RLMCGAKART 60 NFPYDPHASK GPKSQLLSAT LTAKLQRWYL QSLQPDAQQG KKSSSRMSQS SLPCLCQLKH 120 AEQSNLGSCQ NQISSSQPLE SNLVRIEHFD DNADSFQAQP QPASSSDSCI SEEDKFAAEM 180 IEELLSWQTS SQFYGSFNSP TMSDSGSSSP CSVLTASGY*
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |