PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c19_2940V3.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family G2-like
Protein Properties Length: 226aa    MW: 25178.4 Da    PI: 8.8866
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c19_2940V3.4.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.22.7e-111233355
            G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55
                       +++m+vkgLtl+h+kSHLQkYRl
  Pp3c19_2940V3.4.p  1 MRVMGVKGLTLYHLKSHLQKYRL 23
                       789*******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.0E-10124IPR009057Homeodomain-like
PfamPF143793.1E-2162109IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MRVMGVKGLT LYHLKSHLQK YRLGKQLNRD QHLQNKDGSL QRSNSLSDGM QQLKPQNLQD  60
GMQMSEQLQL QLEVQQRLHD QLEVQRHLQM RIQAQGKYLQ SILEKAKETL ASHTMESPSL  120
EAAHAELSEL ATKVTTLGMF PSGFSNINMP GMAQPDPLMA LHPQPRQPAR NSDASPQKSF  180
LNTNAEDNKG VSGSGDPQGA SGNYMSNSEF AFFHQLPNDA FRLTN*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024403588.11e-162protein PHR1-LIKE 2-like
SwissprotQ94A572e-40PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBLA0A2K1IWZ21e-163A0A2K1IWZ2_PHYPA; Uncharacterized protein
STRINGPP1S109_107V6.11e-162(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.17e-29G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]