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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pp3c19_19610V3.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
|
| Family |
LBD |
| Protein Properties |
Length: 266aa MW: 27453.8 Da PI: 8.7421 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pp3c19_19610V3.2.p | genome | COSMOSS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 145.4 | 1.6e-45 | 31 | 130 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasn++kll++lp ++reda++sl+yeA+ar++dPvyG+vg i+ lq+q++ql+
Pp3c19_19610V3.2.p 31 PCAACKFLRRKCTSECVFAPYFPPDQPHKFANVHKIFGASNITKLLNELPMHQREDAVNSLAYEADARVKDPVYGCVGAISVLQRQVAQLQ 121
7****************************************************************************************** PP
DUF260 92 aelallkee 100
+ela +++
Pp3c19_19610V3.2.p 122 NELAIAHSD 130
****99875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MRVVVQERID GFRDALSTTM KRGMASSSSS PCAACKFLRR KCTSECVFAP YFPPDQPHKF 60
ANVHKIFGAS NITKLLNELP MHQREDAVNS LAYEADARVK DPVYGCVGAI SVLQRQVAQL 120
QNELAIAHSD LARYASAGMV VPSVGQGGAS SSLGVGMNLS RGQPNREQML TREQLMDLAR 180
DPSHLSREHL MELARGGGGS YETLQALGLS GALGPLGPFP SNPRPGGESG NRSGGEGGNG 240
GGGGRGGGGG GGASGSNTGG QVTSP*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 242 | 250 | GGRGGGGGG |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in a band of cells at the adaxial base of all lateral organs formed from the shoot apical meristem and at the base of lateral roots. {ECO:0000269|PubMed:12068116}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Not known; ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Positively regulated within the shoot apex by both ASYMMETRIC LEAVES 1 (AS1) and ASYMMETRIC LEAVES 2 (AS2/LBD6) and by KNAT1. {ECO:0000269|PubMed:11934861}. |
