PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c17_11650V3.3.p
Common NamePHYPADRAFT_230365
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 785aa    MW: 84210 Da    PI: 10.5383
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c17_11650V3.3.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.31.2e-06392450162
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                         eke +r rr q NRe+Ar   +RK+  +e L++k+ eL+ae + Lk    +l+++v++lk +
  Pp3c17_11650V3.3.p 392 EKEARRLRRVQANRESARQTIRRKQVLCEDLARKARELQAEKDNLK---LTLEQKVKELKRH 450
                         799*******************************************...7777777777754 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.8E-4390452No hitNo description
SMARTSM003381.9E-4392456IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.852394457IPR004827Basic-leucine zipper domain
CDDcd147023.80E-12397441No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000006anatomyplant protoplast
PO:0025017anatomyplant spore
PO:0030003anatomyprotonema
PO:0030018anatomygametophore
Sequence ? help Back to Top
Protein Sequence    Length: 785 aa     Download sequence    Send to blast
MESSGEVIKE PIPSRLASGK EPGRSVKRKR AVSESEQGHK RSHGASGVNS SSRTPSKSKC  60
IKDAGAVNSI AGKRKRSTTV EEDPEMDSEH VMNAAQALFD LFAGAGTFKN DATDSKSGEG  120
KADGVKWAGK KNRSSRSSKR PDDSFKLSSS STTSATVTDI PEVLDSSASH NHHVVASHPH  180
ASQTGAQTVN HEEDSEADAD AKSTDMSPCG LGFDRGHRLL SQSSVESTLL DSRAESPSSP  240
LRVLRPEADL IPKVEEELML QFGFQRNPPL RPVTKPSIFW KLKGEENCIV EVDESKDVKL  300
ALKQAQRRKP RAPNVKGQSP MLQGDVLDVP LASSGIVLKE FIEENKFQVP VTLNLFESVK  360
EEIGRAKLGG RELYQTGSST QGRLRSALSE AEKEARRLRR VQANRESARQ TIRRKQVLCE  420
DLARKARELQ AEKDNLKLTL EQKVKELKRH QEINRHLKEQ IPLQAESLDA PVSSSKGSAT  480
ASPAPATGPV GGIPMLPYWW AFALAQSVGA TQSSGTPQMP GGAVMPPDFN AVFAATVAAF  540
NNGAAMNPNM WMNLVANMSK GQAPGIVAAP DQQPSLAHSA ARPAGTPELP QKPSASMSGG  600
TDRSQGLGMS PMTKNYVSAS PMKGVANADP VVALSGSSPQ TSRKISVGLP SMPSSHQSRG  660
KYQVARLRTP ASHSLQRTGS GMTQYHVAGD GTVSTSITLS LGLGSHQLHH PGRTEQMRKP  720
GNLKFFPTIG NGVKGFLGPR VGAFQSEAAA KATEARRRRR ELKRTKSLQS QLQHDKKLVS  780
AISL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024400833.10.0uncharacterized protein LOC112294527 isoform X1
TrEMBLA0A2K1J3J40.0A0A2K1J3J4_PHYPA; Uncharacterized protein
STRINGPP1S105_16V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.11e-15bZIP family protein
Publications ? help Back to Top
  1. Rensing SA, et al.
    The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants.
    Science, 2008. 319(5859): p. 64-9
    [PMID:18079367]