PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c17_11650V3.3.p | ||||||||
Common Name | PHYPADRAFT_230365 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 785aa MW: 84210 Da PI: 10.5383 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 20.3 | 1.2e-06 | 392 | 450 | 1 | 62 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 eke +r rr q NRe+Ar +RK+ +e L++k+ eL+ae + Lk +l+++v++lk + Pp3c17_11650V3.3.p 392 EKEARRLRRVQANRESARQTIRRKQVLCEDLARKARELQAEKDNLK---LTLEQKVKELKRH 450 799*******************************************...7777777777754 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.8E-4 | 390 | 452 | No hit | No description |
SMART | SM00338 | 1.9E-4 | 392 | 456 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.852 | 394 | 457 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 3.80E-12 | 397 | 441 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0000006 | anatomy | plant protoplast | ||||
PO:0025017 | anatomy | plant spore | ||||
PO:0030003 | anatomy | protonema | ||||
PO:0030018 | anatomy | gametophore |
Sequence ? help Back to Top |
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Protein Sequence Length: 785 aa Download sequence Send to blast |
MESSGEVIKE PIPSRLASGK EPGRSVKRKR AVSESEQGHK RSHGASGVNS SSRTPSKSKC 60 IKDAGAVNSI AGKRKRSTTV EEDPEMDSEH VMNAAQALFD LFAGAGTFKN DATDSKSGEG 120 KADGVKWAGK KNRSSRSSKR PDDSFKLSSS STTSATVTDI PEVLDSSASH NHHVVASHPH 180 ASQTGAQTVN HEEDSEADAD AKSTDMSPCG LGFDRGHRLL SQSSVESTLL DSRAESPSSP 240 LRVLRPEADL IPKVEEELML QFGFQRNPPL RPVTKPSIFW KLKGEENCIV EVDESKDVKL 300 ALKQAQRRKP RAPNVKGQSP MLQGDVLDVP LASSGIVLKE FIEENKFQVP VTLNLFESVK 360 EEIGRAKLGG RELYQTGSST QGRLRSALSE AEKEARRLRR VQANRESARQ TIRRKQVLCE 420 DLARKARELQ AEKDNLKLTL EQKVKELKRH QEINRHLKEQ IPLQAESLDA PVSSSKGSAT 480 ASPAPATGPV GGIPMLPYWW AFALAQSVGA TQSSGTPQMP GGAVMPPDFN AVFAATVAAF 540 NNGAAMNPNM WMNLVANMSK GQAPGIVAAP DQQPSLAHSA ARPAGTPELP QKPSASMSGG 600 TDRSQGLGMS PMTKNYVSAS PMKGVANADP VVALSGSSPQ TSRKISVGLP SMPSSHQSRG 660 KYQVARLRTP ASHSLQRTGS GMTQYHVAGD GTVSTSITLS LGLGSHQLHH PGRTEQMRKP 720 GNLKFFPTIG NGVKGFLGPR VGAFQSEAAA KATEARRRRR ELKRTKSLQS QLQHDKKLVS 780 AISL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024400833.1 | 0.0 | uncharacterized protein LOC112294527 isoform X1 | ||||
TrEMBL | A0A2K1J3J4 | 0.0 | A0A2K1J3J4_PHYPA; Uncharacterized protein | ||||
STRING | PP1S105_16V6.1 | 0.0 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 1e-15 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pp3c17_11650V3.3.p |
Entrez Gene | 5931902 |
Publications ? help Back to Top | |||
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