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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pp3c17_10170V3.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
ERF |
Protein Properties |
Length: 319aa MW: 34895.8 Da PI: 8.3947 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c17_10170V3.1.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr ++ +gr++AeIrd ++ ++r++lg+f+tae+Aa+a++ a+++l+g
Pp3c17_10170V3.1.p 20 HFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDTAEGAARAYDTAARALRG 69
69*******.**********883....5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MTSREEKEIT KGNQTDLGVH FRGVRKRPWG RFAAEIRDPW KKTRVWLGTF DTAEGAARAY 60 DTAARALRGS KAKTNFTCPL SSEDQSTSQS STLESWSTSP TSSHNVHHPY RQYQHLLPKQ 120 QHPNCGSSAA LDTASWRSCL DLNLSAMAPI DHHVQTQDIA QAQNMRINVG HSYVSRGEVA 180 EVAHSTKRPS STPIQTLFQE SLISLKKPLI HSVPAVDVSV SQVEWSLGNS SDRNGTIVTG 240 SVTTPEMRTS SSDCDSSSSV ILNTESPETK PTSRGSSILL DLNFPPCHDE QSAVTAADNF 300 CLSRPRITAF FLKSTGRV*
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |