PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pp3c16_6810V3.1.p

Organism

Physcomitrella patens

Taxonomic ID

3218

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella

Family

Dof

Protein Properties

Length: 152aa MW: 17819.4 Da PI: 10.933

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pp3c16_6810V3.1.p	genome	COSMOSS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	30.1	1e-09	29	67	4	45
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGa 45 ++++c rC st+ kf y nn +qPry C++Cr +G + Pp3c16_6810V3.1.p 29 RSKACQRCGSTDVKFKYLNN--KKQPRYECRTCRN-GVRGSS 67 5679*************8..58*******85.345555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	3.5E-9	30	61	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence Send to blast
MESPSTSRRP TEARPRNREA QEPEEFANRS KACQRCGSTD VKFKYLNNKK QPRYECRTCR 60 NGVRGSSLFN PFPMRPLHRK GYLKIPALQT MEFMVQVKVC PRCKSSTHVR FLDHNNKSPK 120 HPQYRFREWK LDFSPFSPFK LRVTGSQKGH E*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2K1J7G7	1e-108	A0A2K1J7G7_PHYPA; Uncharacterized protein
STRING	PP1S341_82V6.1	1e-109	(Physcomitrella patens)

Link Out ? help Back to Top
Phytozome	Pp3c16_6810V3.1.p