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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pp3c16_17550V3.3.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
ERF |
Protein Properties |
Length: 368aa MW: 39612.9 Da PI: 4.8066 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c16_17550V3.3.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.9 | 4.6e-17 | 64 | 114 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr++ +g+WvAeIr+p + r r +lg++ tae Aa a++ a++ l+g
Pp3c16_17550V3.3.p 64 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTYPTAEIAALAYDSAARVLYG 114
56*****999.**********8...3.35**********************98876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MQHGSSVAET LAWWASRNNG IGGKAGANQA DDSNGPRKII RKAPARGSKK GCMKGKGGPE 60 NAMCNYRGVR QRTWGKWVAE IREPNRGSRL WLGTYPTAEI AALAYDSAAR VLYGSNALLN 120 LPGETASPVA GTASTSATSA SSAEIAISDD RSSAKSERVT AKRTPAKHTG KPNNSAASFT 180 DPDPSATLDT ATSLSQHQAA EVALSYDLLE PLPRHPKPEP VQELQLSAEP SFPPLLQEPQ 240 EPMDCNDLLG KEFDLFDFKM DEGDMQLPPS LKTNSNSSTM TDSSAFSRDL WTELACHGDI 300 SETVLDSDHS IASSTTLGED KPEDVHVLRS LTEDDMQRLT MPESPEVTLF EISPSLNRKE 360 AWTSLLE*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 1e-17 | 65 | 122 | 2 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |