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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c15_5820V3.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 251aa MW: 27553.6 Da PI: 5.8537 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52.4 | 1.1e-16 | 137 | 195 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r++r+++NRe+ArrsR+RK++ ++eL+ +++L aeN+ + ++ + ++++a+l+ e+ Pp3c15_5820V3.2.p 137 RRQKRMISNRESARRSRLRKQQHLDELRSQIAQLRAENTHMLNRFSLASQQYAQLTEEN 195 79*****************************************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-16 | 133 | 197 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.151 | 135 | 198 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.3E-12 | 137 | 193 | No hit | No description |
Pfam | PF00170 | 9.6E-13 | 137 | 195 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.64E-12 | 137 | 191 | No hit | No description |
CDD | cd14702 | 1.08E-21 | 138 | 189 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 140 | 155 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MGAMEMTGAE EKMQGEVGTM SRAAPVDDLF APMGRLDVQS LGVGLGSERG EGGNASLFSS 60 CAISSNVRSR TAEKSPTSGP NLALDVNHLD ISGLSRDYYE GERHDIGGDT SFSPRVNNLE 120 GQSNFTSDDD QVVVDERRQK RMISNRESAR RSRLRKQQHL DELRSQIAQL RAENTHMLNR 180 FSLASQQYAQ LTEENCVLRS NATDMRHQLQ MLHHAASSHQ PLSLERGLGT VQPLPLNLSL 240 CSGLTEDANW * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 155 | RRSRLRK |
2 | 149 | 156 | RRSRLRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppa.727 | 0.0 | gametophore| protonema |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00267 | DAP | Transfer from AT2G18160 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024396091.1 | 0.0 | bZIP transcription factor 44-like isoform X1 | ||||
TrEMBL | A0A2K1JC48 | 1e-122 | A0A2K1JC48_PHYPA; Uncharacterized protein | ||||
STRING | PP1S158_113V6.1 | 1e-102 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP551 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 6e-20 | basic leucine-zipper 44 |
Link Out ? help Back to Top | |
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Phytozome | Pp3c15_5820V3.2.p |