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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pp3c15_21740V3.1.p |
Common Name | PHYPADRAFT_110468 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
Trihelix |
Protein Properties |
Length: 319aa MW: 36241.5 Da PI: 7.1529 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c15_21740V3.1.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 53.1 | 8.5e-17 | 58 | 141 | 2 | 79 |
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79
Wt e+l+L +arre+ +r+rrg+ +++ +W+++ ++ +++g+++s++qC++kwe l ++kk++++ek+ +++s +
Pp3c15_21740V3.1.p 58 WTAAEILVLQAARREDFDRVRRGNlkerhkSAQERWKWIEDYGWSQGVHKSAQQCQDKWELLVSEFKKVNDHEKNLPGGQKSYW 141
*********************985444555999*****************************************9865555555 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MADHMGPPPC GLGHHALADA LVDDRDHHNH TGSEDDVFGD RRKGDVFRKG RIYKKGNWTA 60 AEILVLQAAR REDFDRVRRG NLKERHKSAQ ERWKWIEDYG WSQGVHKSAQ QCQDKWELLV 120 SEFKKVNDHE KNLPGGQKSY WDMSKEERKK TVMPPNFYKD VYNALSEWYC KGRPADPGEL 180 DTSGPLRHTG VSHRSLSLQA ASDAEFSVPE DSDGDGDPES LLRKQKRKSS LFPLSEEYGL 240 ACILKINNKR VIDAMMESED RKDKRHREDI DMEEKKLDFE REKFRGTMQL GAGYINALNS 300 IGDGLKQLGA ALSATSQA*
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