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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pp3c15_1990V3.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
ERF |
Protein Properties |
Length: 324aa MW: 35179.2 Da PI: 7.8501 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c15_1990V3.1.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.8 | 3.6e-20 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr ++ +gr++AeIrd ++ ++r++lg+f+taeeAa+a++ a+++l+g
Pp3c15_1990V3.1.p 20 HFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDTAEEAARAYDSAARALRG 69
69*******.**********883....5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0016020 | Cellular Component | membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MAARDEKAST KSSQAYQGVH FRGVRKRPWG RFAAEIRDPW KKTRVWLGTF DTAEEAARAY 60 DSAARALRGS KAKTNFACPP SSDDQSTSHS STVESWSTLP SCQNVCQPHH QHHQLLKNHP 120 NSLNCHQLYG PSVASEADSW RTSLDLNLSA MVPHDPDHQV EEMAQVLNES ISAGRSYVLP 180 GNAGELSQSS KRHSSTPIQT LFQDTMGKTS YSAKKPSILA VPPVRTSAIP WSLGARWDQN 240 VALPTGIQPT LLTPGSAVSP ETRACSSDCD SSSSVIVNSE SPEIVATPQQ RTKPVLRRNF 300 PFLLDLNSPP CLDEEPAVTA VGN*
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Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |