PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c14_6250V3.2.p
Common NamePHYPADRAFT_167567
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 759aa    MW: 80924.5 Da    PI: 10.3063
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c14_6250V3.2.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.52.9e-08394443150
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                        eke +r rr q NRe+Ar   +RK+  +eeL++k+ eL+ae + L k l 
  Pp3c14_6250V3.2.p 394 EKEARRLRRVQANRESARQTIRRKQVLCEELARKAGELQAEKDNLSKILL 443
                        799******************************************99876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.4E-5392440No hitNo description
SMARTSM003386.8E-4394461IPR004827Basic-leucine zipper domain
CDDcd147022.32E-12399440No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000006anatomyplant protoplast
PO:0025017anatomyplant spore
PO:0030003anatomyprotonema
PO:0030018anatomygametophore
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    Send to blast
MEAPGEVKKE PVPLKSAAGK ETGRAIKRKR AASESEHSHK RSHGASGTNS KSRMPSKVKA  60
PKDAGAVISS AWKRKRSNMV EEDPELDSEH VMNAAQALFD LFAGAGIPRK DTVESKPGDV  120
KSGGVKWAGK KSRSSRCSKK ADDSCACKLS SSSTTSATVT DIPEILDSST SRNHQLVVSH  180
PHASEAGVET VHVEVDSEAD ADAKSTDMSP CGLDFDRGYR LLSQSSVEST LLDSRAESPS  240
SPLRVLRSEA DLIPKLEEEL MLQFGFQRNL PVRPVTKPSL LRKPKAEENC TIEGDEMKEA  300
KVALKQVQRR KSRASNVKGQ SLILQGDVLD VPTTSSGTVL KECIEENKFQ VPVTLNLFEP  360
VKTETGRVKL EGRELYQTGS STQVRLRSAL SEAEKEARRL RRVQANRESA RQTIRRKQVL  420
CEELARKAGE LQAEKDNLSK ILLQSGSAET SLPANDGGNS ASPAPAAGPV GGMPMLPYWW  480
AFALAQSVAA TQSSGVPQLP EGVVVPPDFN VVFAATVAAL NNGAAMNPNM WMNLMGNMSK  540
AQVPGMVAAP DQQATLTHSA ARPSVTSELP PAGGTDRFQV LGRSPVAKSS ASSSPMKGVT  600
NTDATVIMSK PSSQVSGKIP SGLPSMLSTS HSRGKYQVAS LGAPASHSLQ TTGSGMTQYH  660
VAGDGIASAS TTLSLGPGSH QLQQSGRMDQ LRKAGNLRFF PTIGNGVQGF LGPRVGAYQS  720
EAAAKATEAR RRRRELKRTK SLQSQLQQEK KLVSTKSL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.156410.0gametophore| protonema
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024394866.10.0uncharacterized protein LOC112291539 isoform X2
TrEMBLA9T1K00.0A9T1K0_PHYPA; Predicted protein
STRINGPP1S150_133V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.18e-10bZIP family protein
Publications ? help Back to Top
  1. Rensing SA, et al.
    The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants.
    Science, 2008. 319(5859): p. 64-9
    [PMID:18079367]