PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c14_6250V3.2.p | ||||||||
Common Name | PHYPADRAFT_167567 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 759aa MW: 80924.5 Da PI: 10.3063 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.5 | 2.9e-08 | 394 | 443 | 1 | 50 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 eke +r rr q NRe+Ar +RK+ +eeL++k+ eL+ae + L k l Pp3c14_6250V3.2.p 394 EKEARRLRRVQANRESARQTIRRKQVLCEELARKAGELQAEKDNLSKILL 443 799******************************************99876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.4E-5 | 392 | 440 | No hit | No description |
SMART | SM00338 | 6.8E-4 | 394 | 461 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.32E-12 | 399 | 440 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0000006 | anatomy | plant protoplast | ||||
PO:0025017 | anatomy | plant spore | ||||
PO:0030003 | anatomy | protonema | ||||
PO:0030018 | anatomy | gametophore |
Sequence ? help Back to Top |
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Protein Sequence Length: 759 aa Download sequence Send to blast |
MEAPGEVKKE PVPLKSAAGK ETGRAIKRKR AASESEHSHK RSHGASGTNS KSRMPSKVKA 60 PKDAGAVISS AWKRKRSNMV EEDPELDSEH VMNAAQALFD LFAGAGIPRK DTVESKPGDV 120 KSGGVKWAGK KSRSSRCSKK ADDSCACKLS SSSTTSATVT DIPEILDSST SRNHQLVVSH 180 PHASEAGVET VHVEVDSEAD ADAKSTDMSP CGLDFDRGYR LLSQSSVEST LLDSRAESPS 240 SPLRVLRSEA DLIPKLEEEL MLQFGFQRNL PVRPVTKPSL LRKPKAEENC TIEGDEMKEA 300 KVALKQVQRR KSRASNVKGQ SLILQGDVLD VPTTSSGTVL KECIEENKFQ VPVTLNLFEP 360 VKTETGRVKL EGRELYQTGS STQVRLRSAL SEAEKEARRL RRVQANRESA RQTIRRKQVL 420 CEELARKAGE LQAEKDNLSK ILLQSGSAET SLPANDGGNS ASPAPAAGPV GGMPMLPYWW 480 AFALAQSVAA TQSSGVPQLP EGVVVPPDFN VVFAATVAAL NNGAAMNPNM WMNLMGNMSK 540 AQVPGMVAAP DQQATLTHSA ARPSVTSELP PAGGTDRFQV LGRSPVAKSS ASSSPMKGVT 600 NTDATVIMSK PSSQVSGKIP SGLPSMLSTS HSRGKYQVAS LGAPASHSLQ TTGSGMTQYH 660 VAGDGIASAS TTLSLGPGSH QLQQSGRMDQ LRKAGNLRFF PTIGNGVQGF LGPRVGAYQS 720 EAAAKATEAR RRRRELKRTK SLQSQLQQEK KLVSTKSL* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppa.15641 | 0.0 | gametophore| protonema |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024394866.1 | 0.0 | uncharacterized protein LOC112291539 isoform X2 | ||||
TrEMBL | A9T1K0 | 0.0 | A9T1K0_PHYPA; Predicted protein | ||||
STRING | PP1S150_133V6.1 | 0.0 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 8e-10 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pp3c14_6250V3.2.p |
Entrez Gene | 5935694 |
Publications ? help Back to Top | |||
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