PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c14_6250V3.1.p
Common NamePHYPADRAFT_167567
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 794aa    MW: 85184.3 Da    PI: 10.2586
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c14_6250V3.1.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.71e-07407467161
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                        eke +r rr q NRe+Ar   +RK+  +eeL++k+ eL+ae + L k+le+  ke  +++ 
  Pp3c14_6250V3.1.p 407 EKEARRLRRVQANRESARQTIRRKQVLCEELARKAGELQAEKDNLSKTLEQKAKELRNHQE 467
                        799*******************************************999999998887765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-4405467No hitNo description
SMARTSM003381.7E-5407471IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.979409472IPR004827Basic-leucine zipper domain
CDDcd147021.22E-13412463No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000006anatomyplant protoplast
PO:0025017anatomyplant spore
PO:0030003anatomyprotonema
PO:0030018anatomygametophore
Sequence ? help Back to Top
Protein Sequence    Length: 794 aa     Download sequence    Send to blast
MTPVPRDCYD SRIMEAPGEV KKEPVPLKSA AGKETGRAIK RKRAASESEH SHKRSHGASG  60
TNSKSRMPSK VKAPKDAGAV ISSAWKRKRS NMVEEDPELD SEHVMNAAQA LFDLFAGAGI  120
PRKDTVESKP GDVKSGGVKW AGKKSRSSRC SKKADDSCAC KLSSSSTTSA TVTDIPEILD  180
SSTSRNHQLV VSHPHASEAG VETVHVEVDS EADADAKSTD MSPCGLDFDR GYRLLSQSSV  240
ESTLLDSRAE SPSSPLRVLR SEADLIPKLE EELMLQFGFQ RNLPVRPVTK PSLLRKPKAE  300
ENCTIEGDEM KEAKVALKQV QRRKSRASNV KGQSLILQGD VLDVPTTSSG TVLKECIEEN  360
KFQVPVTLNL FEPVKTETGR VKLEGRELYQ TGSSTQVRLR SALSEAEKEA RRLRRVQANR  420
ESARQTIRRK QVLCEELARK AGELQAEKDN LSKTLEQKAK ELRNHQEINR HLKEQILLQS  480
GSAETSLPAN DGGNSASPAP AAGPVGGMPM LPYWWAFALA QSVAATQSSG VPQLPEGVVV  540
PPDFNVVFAA TVAALNNGAA MNPNMWMNLM GNMSKAQVPG MVAAPDQQAT LTHSAARPSV  600
TSELPPAGGT DRFQVLGRSP VAKSSASSSP MKGVTNTDAT VIMSKPSSQV SGKIPSGLPS  660
MLSTSHSRGK YQVASLGAPA SHSLQTTGSG MTQYHVAGDG IASASTTLSL GPGSHQLQQS  720
GRMDQLRKAG NLRFFPTIGN GVQGFLGPRV GAYQSEAAAK ATEARRRRRE LKRTKSLQSQ  780
LQQEKKLVST KSL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.156410.0gametophore| protonema
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024394864.10.0uncharacterized protein LOC112291539 isoform X1
RefseqXP_024394865.10.0uncharacterized protein LOC112291539 isoform X1
TrEMBLA0A2K1JGL90.0A0A2K1JGL9_PHYPA; Uncharacterized protein
STRINGPP1S150_133V6.10.0(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP45691318
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.17e-16bZIP family protein
Publications ? help Back to Top
  1. Rensing SA, et al.
    The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants.
    Science, 2008. 319(5859): p. 64-9
    [PMID:18079367]