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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pp3c14_3310V3.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
ERF |
Protein Properties |
Length: 508aa MW: 54827.3 Da PI: 4.5808 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c14_3310V3.1.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.3 | 3.4e-17 | 214 | 263 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W++eIr k r +lg+++tae+Aa+a+++ +++++g
Pp3c14_3310V3.1.p 214 KYRGVRQRP-WGKWASEIRTaS----KGVRLWLGTYDTAEQAAQAYDKGAREIRG 263
8********.**********44....35************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 508 aa
Download sequence Send
to blast |
MQGCDQLASS SPFKRKLSTI RSGKTVKREY SAPYDNSSAQ TTRYHRVPKR VRVICTDPDA 60 TDSSSDEKDN FHSVRNPHRR LQEIHISTMV DESSSDSEVD ELEVPSYHSV FTAEAMQCTV 120 SYASPVDGDA MLESSRFYKK SWQSQKKALK MPEKKMPKDA QPATPAAKTA KGSVAGWAPV 180 GRSTTVSTAK PTVAAKRQTK GALVATGIHG KPQKYRGVRQ RPWGKWASEI RTASKGVRLW 240 LGTYDTAEQA AQAYDKGARE IRGPSAHTNF SEERELEQSG AVVRTMTMSG CEASCAKSRK 300 GEEGRWRGKE EGERCGRGEV EEGEEEEELQ TAGGCGSIEE GAMSGEVALD DLSEELGNLS 360 EELENWSEEC GYWMGSPCSS SPSMEESEGS PCSSLTGCSE RVGRGGGGEE LVTSSSYGNS 420 CESERAKEGN GTVEVQSGSG LGEVFLSDDF MMDWAGVGVG VGDDGGAGMV EFGAGLEFLG 480 DDVEYLEFDC DGRESFDWLN GSDILVL*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5wx9_A | 4e-17 | 207 | 276 | 7 | 77 | Ethylene-responsive transcription factor ERF096 |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |