PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c14_24440V3.1.p
Common NamePHYPADRAFT_128310
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 126aa    MW: 14500.5 Da    PI: 9.9134
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c14_24440V3.1.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-1093124637
                         HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvke 37 
                         r++r+++NRe ArrsR+RK++ ++eL+  +  
  Pp3c14_24440V3.1.p  93 RQKRMISNRELARRSRLRKQQHLDELRSQISH 124
                         89************************998765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.8E-790124No hitNo description
PROSITE profilePS502178.6890125IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.05E-793124No hitNo description
CDDcd147028.59E-1493125No hitNo description
PfamPF001703.8E-793124IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0030018anatomygametophore
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MYVFPCIPVF WKRRILHRPC FIPTTPCDCA GARLGLNLNQ SELSGLSRHS CEEISKKVHD  60
NGGETHSSPR NKEPKVQSNH TFDDDQLVIS EGRQKRMISN RELARRSRLR KQQHLDELRS  120
QISHL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104110RRSRLRK
2104111RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.110611e-103gametophore| protonema
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024392804.11e-48basic leucine zipper 63-like
RefseqXP_024392805.11e-48basic leucine zipper 63-like
RefseqXP_024392806.11e-48basic leucine zipper 63-like
RefseqXP_024392808.11e-48basic leucine zipper 63-like
TrEMBLA9SE265e-88A9SE26_PHYPA; Predicted protein
STRINGPP1S69_141V6.19e-89(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15830.12e-12basic leucine-zipper 3
Publications ? help Back to Top
  1. Rensing SA, et al.
    The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants.
    Science, 2008. 319(5859): p. 64-9
    [PMID:18079367]