PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c14_24440V3.1.p | ||||||||
Common Name | PHYPADRAFT_128310 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 126aa MW: 14500.5 Da PI: 9.9134 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.8 | 1.5e-10 | 93 | 124 | 6 | 37 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvke 37 r++r+++NRe ArrsR+RK++ ++eL+ + Pp3c14_24440V3.1.p 93 RQKRMISNRELARRSRLRKQQHLDELRSQISH 124 89************************998765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.8E-7 | 90 | 124 | No hit | No description |
PROSITE profile | PS50217 | 8.68 | 90 | 125 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.05E-7 | 93 | 124 | No hit | No description |
CDD | cd14702 | 8.59E-14 | 93 | 125 | No hit | No description |
Pfam | PF00170 | 3.8E-7 | 93 | 124 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0030018 | anatomy | gametophore |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MYVFPCIPVF WKRRILHRPC FIPTTPCDCA GARLGLNLNQ SELSGLSRHS CEEISKKVHD 60 NGGETHSSPR NKEPKVQSNH TFDDDQLVIS EGRQKRMISN RELARRSRLR KQQHLDELRS 120 QISHL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 104 | 110 | RRSRLRK |
2 | 104 | 111 | RRSRLRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppa.11061 | 1e-103 | gametophore| protonema |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024392804.1 | 1e-48 | basic leucine zipper 63-like | ||||
Refseq | XP_024392805.1 | 1e-48 | basic leucine zipper 63-like | ||||
Refseq | XP_024392806.1 | 1e-48 | basic leucine zipper 63-like | ||||
Refseq | XP_024392808.1 | 1e-48 | basic leucine zipper 63-like | ||||
TrEMBL | A9SE26 | 5e-88 | A9SE26_PHYPA; Predicted protein | ||||
STRING | PP1S69_141V6.1 | 9e-89 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15830.1 | 2e-12 | basic leucine-zipper 3 |
Link Out ? help Back to Top | |
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Phytozome | Pp3c14_24440V3.1.p |
Entrez Gene | 5927847 |
Publications ? help Back to Top | |||
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