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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c13_15010V3.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 260aa MW: 28441.3 Da PI: 6.4376 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.1 | 1.2e-15 | 142 | 200 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r++r+++NRe+ArrsR+RK++ ++eL+ + L aeN L ++ + ++++a+l e+ Pp3c13_15010V3.1.p 142 RRQKRMISNRESARRSRLRKQQHLDELRSQISHLRAENVHLLNRYSLASQQYAQLNEEN 200 79*****************************************************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.1E-12 | 134 | 196 | No hit | No description |
SMART | SM00338 | 1.1E-17 | 138 | 202 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.335 | 140 | 203 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.31E-12 | 142 | 196 | No hit | No description |
Pfam | PF00170 | 4.6E-12 | 142 | 200 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.58E-22 | 143 | 194 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 145 | 160 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009845 | Biological Process | seed germination | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MGAMEVTGEE KDVQKGGSMP RAPSVDDLFV PMGRLDMHSS GMGADNEEVK EGGNTSASNV 60 CGSSSLVHSA TAEKTPSASD GARLGLNLNR SELSGLSRDS CGEISEQVHD KGGETHSSPR 120 NKKPEGQSNH TSDDDQPVID ERRQKRMISN RESARRSRLR KQQHLDELRS QISHLRAENV 180 HLLNRYSLAS QQYAQLNEEN SVLRSNAVDL RHQLQTLHPG TSGHQMMTLE PRDLSSVQPL 240 PLNLSLCSGP IEDPNWGKY* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 154 | 160 | RRSRLRK |
2 | 154 | 161 | RRSRLRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppa.11061 | 0.0 | gametophore| protonema |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00239 | DAP | Transfer from AT1G75390 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024392804.1 | 0.0 | basic leucine zipper 63-like | ||||
Refseq | XP_024392805.1 | 0.0 | basic leucine zipper 63-like | ||||
Refseq | XP_024392806.1 | 0.0 | basic leucine zipper 63-like | ||||
Refseq | XP_024392808.1 | 0.0 | basic leucine zipper 63-like | ||||
TrEMBL | A0A2K1JM15 | 0.0 | A0A2K1JM15_PHYPA; Uncharacterized protein | ||||
STRING | PP1S158_113V6.1 | 0.0 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP551 | 16 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 1e-24 | basic leucine-zipper 44 |
Link Out ? help Back to Top | |
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Phytozome | Pp3c13_15010V3.1.p |