PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c11_17710V3.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 278aa    MW: 29838.6 Da    PI: 6.0696
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c11_17710V3.3.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.41.5e-13196258163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         +ke kr +r+ +NR++A+  R+RKka++ eLe ++keLe  N +L +++++l+ e + l++ v
  Pp3c11_17710V3.3.p 196 DKEHKRLKRLLRNRVSAQQARERKKAYLGELEVRSKELEHRNAELEERVSTLQRENQMLRQIV 258
                         5899*****************************************************999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.5E-14196260IPR004827Basic-leucine zipper domain
PfamPF001707.9E-13197258IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.266198261IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-15200260No hitNo description
SuperFamilySSF579595.69E-12200258No hitNo description
CDDcd147046.69E-22201252No hitNo description
PROSITE patternPS000360203218IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010017Biological Processred or far-red light signaling pathway
GO:0010099Biological Processregulation of photomorphogenesis
GO:0010114Biological Processresponse to red light
GO:0010218Biological Processresponse to far red light
GO:0010224Biological Processresponse to UV-B
GO:0031539Biological Processpositive regulation of anthocyanin metabolic process
GO:0042753Biological Processpositive regulation of circadian rhythm
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003690Molecular Functiondouble-stranded DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MNDFDEPQGD SRVQCEAESE ADHSSDCYSS GSGEETDAEV PDVADPSACN SNLLQDAQNG  60
KGFSQLTSVI GNINSVANSS RRGPREAVDI GRNWKPVNFG EYQGLGEILP MQASTVGPAS  120
SPPSSKQQTG TDISVSPPLA TAAVDKLMKD GNESDSDVRR VPELSAKTSG GVSGSHTQDK  180
GLTGSSHRKR GGASADKEHK RLKRLLRNRV SAQQARERKK AYLGELEVRS KELEHRNAEL  240
EERVSTLQRE NQMLRQIVKN TALKKTYSGG NAEDGAQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.109560.0gametophore| protonema
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00117ampDAPTransfer from AT5G11260Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024381386.11e-171transcription factor HY5-like
TrEMBLA0A2K1JV370.0A0A2K1JV37_PHYPA; Uncharacterized protein
STRINGPP1S87_156V6.11e-155(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.12e-41bZIP family protein