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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pp3c10_6570V3.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
ERF |
Protein Properties |
Length: 537aa MW: 58001.1 Da PI: 4.3795 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c10_6570V3.2.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.9 | 7.8e-21 | 221 | 270 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdps+ r +lg+++tae+Aa+a+++a+++++g
Pp3c10_6570V3.2.p 221 KYRGVRQRP-WGKWAAEIRDPSK---GVRLWLGTYDTAEQAAEAYDKAAREIRG 270
8********.**********965...4*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 537 aa
Download sequence Send
to blast |
MPGYSEIFSS GVKPDSPPKR KTFTVAPRKA LKRDYSSSSD DEGVVLRFQR VPKRVRVICT 60 DPDATDSSGD EEDSFQLARN PHKRFVQEIQ MESQSITEDE FSSDNEFNET ETQSSHSAFT 120 AETMLCPVSY ASPGDRESML ESSNFYDKSW QSRLKAPKVS EKKVPRVTAT LAAAKTKNSS 180 AAPSVSVGKS IAVFNAKPLA STKPAAIADS VPAKSDGKPQ KYRGVRQRPW GKWAAEIRDP 240 SKGVRLWLGT YDTAEQAAEA YDKAAREIRG PTAHTNFSAG RKVEVATTTK SACEVLSKKS 300 TKKVEALAKG SRSCKKEGVT CERKEVEVGR GGCSSEPLCA VEVERIMDAD STESCMQRCE 360 VEGLHMLDMC GSIGEELMGD DLLFDNLSDD FENSGDDLDS LSEKCGYFMG SPSSFSVDGS 420 EGSPCSNLTA CEPFSTEAGV DNSFGSSSEN SSDSESLNES NCLVEVQSAC DLGEVFLSDN 480 FLFDFPGVDG DCGASADLLD ISTGFSFLEG DLGNLAFDCD ENESMNWLNI SDVLVV*
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