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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pp3c10_11910V3.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family |
ERF |
Protein Properties |
Length: 317aa MW: 34252.6 Da PI: 4.232 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pp3c10_11910V3.2.p | genome | COSMOSS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.5 | 2.1e-20 | 12 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr++ +g+WvAeIr+p + r r +lg++gtaeeAa a+++a++ l+g
Pp3c10_11910V3.2.p 12 CSYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTYGTAEEAALAYDEAARVLYG 62
67*****999.**********8...3.35**********************98876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MKGKGGPENA QCSYRGVRQR TWGKWVAEIR EPNRGSRLWL GTYGTAEEAA LAYDEAARVL 60 YGLNALLNLP DRGPTAPASN FGVSEGSRNN QENSGLGYRK SNLGGGPTES AASGTVPDGQ 120 DEGLDTADSG SPRKLLEASI AEMSRTSPRR LAAEAILPES SSSWLEDNDA HEPNEALDLE 180 KVRNEQIVFN DLLDVEDLDI LDPKLAELPR LLRSNSDSST MTDSSVFSKD LWEELACHMT 240 ISDGTLESGK SNDSSSLTAN NMEKHDVRCD DVEGICISDG QLVSPYSPEV EMLDNSPLMQ 300 KKQAWTTLLS DQASPS*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 3e-18 | 14 | 72 | 3 | 62 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |