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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.T036500.1 |
Common Name | POPTR_0003s00210g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
B3 |
Protein Properties |
Length: 106aa MW: 11642.2 Da PI: 7.613 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.T036500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 33.8 | 5.9e-11 | 7 | 99 | 5 | 94 |
-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS....-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
B3 5 ltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesg....rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92
++s l++g lvlp++ e g ke s ++e+ g ++ + + +sg+ v+t+GW + +++ gL++gD+v+F+ +++ ++++
Potri.T036500.1 7 KLTSIDLERG-LVLPRDSNLEPlqpfHGTKELS--TIVESAAGtrlpDPVTIHC--STRSGKLVFTRGWHDIARDAGLRSGDIVTFYQEENGGAQY 97
4456666666.8888887655578775555554..6667888855444444555..999999*************************666566555 PP
EE CS
B3 93 vv 94
++
Potri.T036500.1 98 KM 99
54 PP
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC217036 | 1e-130 | AC217036.1 Populus trichocarpa clone POP039-B10, complete sequence. |