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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Potri.019G092800.1 |
| Common Name | POPTR_0019s12260g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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| Family |
VOZ |
| Protein Properties |
Length: 450aa MW: 50044 Da PI: 5.1354 |
| Description |
VOZ family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.019G092800.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | VOZ | 451.5 | 9.2e-139 | 210 | 426 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwn 91
pppsaf+gpkcalwdctrpaqg+ew++dycssfhatlalneg+pg+tpvlrp+gi+lkd+llf+al+ak+qgk+vgip+cegaa +kspwn
Potri.019G092800.1 210 PPPSAFMGPKCALWDCTRPAQGAEWCEDYCSSFHATLALNEGPPGMTPVLRPRGINLKDNLLFDALTAKMQGKNVGIPQCEGAAVMKSPWN 300
89***************************************************************************************** PP
VOZ 92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalal 182
aaelfdlsllegetirewlffdkprraf+sgnrkqrslpdysgrgwhesrkqvmke+gg+k+syymdpqp++++ewhlyeyein++da+al
Potri.019G092800.1 301 AAELFDLSLLEGETIREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESRKQVMKELGGKKKSYYMDPQPPGCHEWHLYEYEINNCDACAL 391
******************************************************************************************* PP
VOZ 183 yrlelklvdekksakgkvskdsladlqkklgrlta 217
yrle+kl+d+kk++kgkvskdsl+dlqkk+grlta
Potri.019G092800.1 392 YRLEFKLADGKKTPKGKVSKDSLVDLQKKMGRLTA 426
*********************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 450 aa
Download sequence Send
to blast |
MQKGGKSKCA STSHHLLMDN AKNRLNDLEE RFFNIQTARK EGRNNDVALL EEQVCQSLRE 60
WKAELDVPSP ANSLLDISLG SFSEDIGRLL QLYEEEDDAT SPLTMQSVLK PETQPEPNFQ 120
NLNLGNLTTF QDEYLVNSHS QELGFQGFHQ PNGSSGLQNV AVSDPDITTL LDCHQFTLDE 180
EFDPGHFVGT NDTKECGINS ESNNLQYISP PPSAFMGPKC ALWDCTRPAQ GAEWCEDYCS 240
SFHATLALNE GPPGMTPVLR PRGINLKDNL LFDALTAKMQ GKNVGIPQCE GAAVMKSPWN 300
AAELFDLSLL EGETIREWLF FDKPRRAFDS GNRKQRSLPD YSGRGWHESR KQVMKELGGK 360
KKSYYMDPQP PGCHEWHLYE YEINNCDACA LYRLEFKLAD GKKTPKGKVS KDSLVDLQKK 420
MGRLTAVVTA DNSPSDKGKT NTSGTGHGP*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC213156 | 0.0 | AC213156.1 Populus trichocarpa clone POP076-I18, complete sequence. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Yasui Y,Kohchi T
VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
[PMID:25351333] - Kumar S,Choudhary P,Gupta M,Nath U
VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
Plant Physiol., 2018. 176(4): p. 2917-2930
[PMID:29507119] - Song C,Lee J,Kim T,Hong JC,Lim CO
VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
Planta, 2018. 247(6): p. 1439-1448
[PMID:29536220]
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