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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.019G059300.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 252aa MW: 26690.3 Da PI: 6.7737 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.019G059300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 90.1 | 1.7e-28 | 70 | 130 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqKe+ gs+fpr+YYrCt + +Cp+kk+v+r ++dp +e++Y+geH+++
Potri.019G059300.1 70 EDGFSWRKYGQKEILGSKFPRAYYRCTNQnlyHCPAKKQVQRLDDDPCRLEVVYRGEHTCH 130
7***************************99999**************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MGSGGLAIES GSRSDVESGS RSDVQAVDAS DSGRGSSSSS KRPRIRNDDA EKRTVRVPAQ 60 QFGNTEIPPE DGFSWRKYGQ KEILGSKFPR AYYRCTNQNL YHCPAKKQVQ RLDDDPCRLE 120 VVYRGEHTCH LSATAPSAPP PAPGITQEMA QTMIGQPQPS TATSLGRWVL EFRLGPGGGA 180 GSSSSSSMAA GSSGGAAGPS TVGRYGKEAD YPITDMADAM FNSGSSSTNS MELIFPSISE 240 EKRDQPSDKN N*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JN117932 | 0.0 | JN117932.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor (WRKY36) mRNA, complete cds. |