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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.019G020900.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
G2-like |
Protein Properties |
Length: 477aa MW: 53527.6 Da PI: 5.6285 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.019G020900.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 106.7 | 1.3e-33 | 240 | 294 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k r+rWtpeLHe+Fveav+qLGGse+AtPk +l+ m+v+gLt++hvkSHLQkYR+
Potri.019G020900.1 240 KSRMRWTPELHEAFVEAVNQLGGSERATPKGVLKQMNVEGLTIYHVKSHLQKYRT 294
68****************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 477 aa
Download sequence Send
to blast |
NLEDKSLRLF SIFFFFQNIE FLSNSRESFN LCFHSVFVRE MIRNPASQQA SPLSSGNGSV 60 GHLVSSSSRF TNDTSVSAVS PQGKQSHNSP FISQSLRDGG NFPPTHYSHS EGQSTAFINH 120 SDDNKGLSWP IDPLQEFINF VENVPVQNGQ VESTAGVIAS EDHAKRTDWQ EWADQLISVD 180 DELEPNWSEI LNDVNMKDSK QKMLSPNNSV QQPLIHQHQT AHSGEVCAVT NPLLAAPPTK 240 SRMRWTPELH EAFVEAVNQL GGSERATPKG VLKQMNVEGL TIYHVKSHLQ KYRTARYKPE 300 SSEGTSEKKL SPVEEMKSLD LKTSMEISEA LRLQMEVQKQ LHEQLEIQRN LQLRIEEQGR 360 YLQEMFEKQK KMEGDRSKAP PPSQNDPSLL QSKLEQSPAN DKLETSDLDC VKTRFDICNA 420 SALLEESSQS INRKQKAPED RNCQVVDKNE EKTSLAPVKR PRTDEATALS AEPASN*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 3e-31 | 240 | 298 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 3e-31 | 240 | 298 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 3e-31 | 240 | 298 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 3e-31 | 240 | 298 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 3e-31 | 240 | 298 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 3e-31 | 240 | 298 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 3e-31 | 240 | 298 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 3e-31 | 240 | 298 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in shoots and roots. {ECO:0000269|PubMed:20838596}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Bonnot C, et al.
A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana. New Phytol., 2016. 209(1): p. 161-76 [PMID:26243630] - Aleksza D,Horváth GV,Sándor G,Szabados L
Proline Accumulation Is Regulated by Transcription Factors Associated with Phosphate Starvation. Plant Physiol., 2017. 175(1): p. 555-567 [PMID:28765275]
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