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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.018G141700.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bHLH |
Protein Properties |
Length: 248aa MW: 29002.1 Da PI: 6.2657 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.018G141700.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.3 | 9.9e-12 | 57 | 100 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
Er RR+++ +++ Lre +Pk + Kl+Ka++ + A++YI++Lq
Potri.018G141700.1 57 VSERSRRQKLSDKLLALREAVPKiS------KLDKASVIKDAIKYIQDLQ 100
57*********************66......******************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MEIIDNHFEY QNYWETNRFW NEDLDYSWEM NQQFNVGYYD SSSLDGNTQT IASKNIVSER 60 SRRQKLSDKL LALREAVPKI SKLDKASVIK DAIKYIQDLQ EQERRLQADI RELESRRLEK 120 NHTFDIEDEL PVLLRSKRTR HDQIYDHWLA RSTCPIQVHE LSVTSMGEKT LFVSLTCSKT 180 TDAMIRICEA FEPLKLKIIT ANITTLSGMI KKTVLIEVDE EEKEHLKIKI ERAVLALRSA 240 YNPMMSI*
|
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ363186 | 0.0 | KJ363186.1 Populus euphratica bHLH35 protein mRNA, complete cds. |