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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.018G094700.1 |
Common Name | POPTR_0018s10280g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ARR-B |
Protein Properties |
Length: 518aa MW: 58121.9 Da PI: 6.8388 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.018G094700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 69.9 | 4e-22 | 199 | 253 | 1 | 54 |
G2-like 1 kprlrWtpeLHerFveaveqLGGs.ekAtPktilelmkvkgLtlehvkSHLQkYR 54
kpr+ W++eLH +Fv++ve+L e+ Pk+i+e+m+v+gL++e+++SHLQkYR
Potri.018G094700.1 199 KPRVTWSSELHVKFVDCVEKLEARgERVQPKRIREMMNVEGLSRENIASHLQKYR 253
79*******************76437899************************** PP
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2 | Response_reg | 60 | 1.3e-20 | 29 | 137 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89
vl +d + + ++ l +l+k +y +v++++ + eal++l+e++ ++++++D++ +mdG++ll+ i e +lp+i+v+a+++++ + +
Potri.018G094700.1 29 VLAIDANVVCLKYLVAILQKCQY-RVTSTTLAAEALKMLRENKndYHVVITDVKRLDMDGFKLLEIIGLEM-DLPVILVSAEDSQSSIMKG 117
6788999999*************.***************877778********************996644.8****************** PP
HHTTESEEEESS--HHHHHH CS
Response_reg 90 lkaGakdflsKpfdpeelvk 109
++ Ga+d+l Kp+ ++e+ +
Potri.018G094700.1 118 IRHGARDYLLKPVRIQEMQN 137
**************999876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 518 aa
Download sequence Send
to blast |
MAKNNDEVSE ISMHDEGRGD MFNPADLRVL AIDANVVCLK YLVAILQKCQ YRVTSTTLAA 60 EALKMLRENK NDYHVVITDV KRLDMDGFKL LEIIGLEMDL PVILVSAEDS QSSIMKGIRH 120 GARDYLLKPV RIQEMQNIWQ HVVRKRLSDS SDKSSSFTKE IIEQESVPST EPMAEAEVTG 180 VKEKEIIGNP NGDACSGKKP RVTWSSELHV KFVDCVEKLE ARGERVQPKR IREMMNVEGL 240 SRENIASHLQ KYRNLLKKHK DKMNQQDNAG TDLNRYGRIS ATKNGLWNTY GDSTPKPQSL 300 ASSCTDSKRM FFQPSKQNVF LENSLSSNIT MRKSVPVPEF KGLNFSASSS TWELPTEYTG 360 SQSFGQNPGL CNLSPLLCSP AASFKPSFPM LGQTLIDRSP ASVLSNPSYF PGQYGEGISM 420 NLCGSGTSNF REHDSHCAYR DQKSLLEDFM NSEEAKLFMD EEISDMVNQA IVFFRLTKWQ 480 FDISPLIMVQ TCSTVRQNHN TSFSSPLQFN SDGTPRL*
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