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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.018G019000.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 467aa MW: 51112.3 Da PI: 9.0777 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.018G019000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 79.8 | 2.9e-25 | 126 | 183 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
DgynWrKYG+K vkgs++ rsYYrC +++C +kkkv+++++ ++vv+++Y g+H+h+
Potri.018G019000.1 126 ADGYNWRKYGRKLVKGSKNLRSYYRCVYSSCYAKKKVQHCDRSGRVVDVVYIGDHHHD 183
6********************************************************7 PP
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2 | WRKY | 93 | 2.2e-29 | 330 | 387 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK+ kg+ rsYYrC+s+ Cp++k+ver+++d + +++tYeg+H+h+
Potri.018G019000.1 330 NDGYRWRKYGQKMLKGNSLVRSYYRCSSSACPAHKHVERATDDASSTTVTYEGKHDHD 387
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 467 aa
Download sequence Send
to blast |
MQEQNKDPKE DSNIGFNCDC SSFSQSLKKV ISNSPVLGFQ GGNEMFQQDA CAGTKPEADR 60 VQLEHQAECA NTSSEVLSLT PAVISVPYSA SVPQKPRSMR ALGLVINQQK SDCETRHPHV 120 VESPPADGYN WRKYGRKLVK GSKNLRSYYR CVYSSCYAKK KVQHCDRSGR VVDVVYIGDH 180 HHDPPQKKRI RVVSSAKHTI GSQVVDPSVQ KLVGLDISVC SADGRHSSLH VPESEQQSSS 240 ISNGNAGARI KEKSDDEAES KRCSGSSAVG PQQNGSCGIA STQVQEKHGA EPRLKIRIKE 300 RSAPCSVPVL KTMKEPEIIR HTVSDDGSSN DGYRWRKYGQ KMLKGNSLVR SYYRCSSSAC 360 PAHKHVERAT DDASSTTVTY EGKHDHDMPA PKKRQCSENR LISPAASTDD ARCKKNRSLS 420 SRKPSSRCSV DGEVDLMGEK ISKLGGEQAL ESAQTLLSIG IDLRPR*
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