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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.017G088300.2 |
Common Name | POPTR_0017s12430g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 533aa MW: 58274.8 Da PI: 8.0247 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.017G088300.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 106.1 | 1.8e-33 | 239 | 295 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+DgynWrKYGqK++kgse+prsYY+Ct+ +Cpvkkkvers+ d++++ei+Y+g+Hnh+
Potri.017G088300.2 239 HDGYNWRKYGQKPIKGSEYPRSYYKCTHLNCPVKKKVERSS-DGQITEIIYKGQHNHD 295
7****************************************.***************7 PP
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2 | WRKY | 106.5 | 1.4e-33 | 418 | 476 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+a dpk+v++tYeg+Hnh+
Potri.017G088300.2 418 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERAAADPKAVVTTYEGKHNHD 476
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 533 aa
Download sequence Send
to blast |
MAEKQQNLTT APAPARPTIT LPPRPSMETL FTGGLSPGPM TLVSSFFADS PYPESDYRSF 60 SQLLAGAMAS PIASPAFFND HSIPNNNTNT ATATATATSS KDDGFRQSRP MNLVVARSPL 120 FTVPPGLSPS GLLNSPGFFP PQSPFGMSHQ QALAQVTAHA ALLAQSQMHM HAQYQPSSLT 180 APTELLTRHP SFNPGEALQQ QQQMPHSTSD TQNSVVELTE FSHSERKYQP PAAVDKPTHD 240 GYNWRKYGQK PIKGSEYPRS YYKCTHLNCP VKKKVERSSD GQITEIIYKG QHNHDLPQPN 300 KRSKDCNDSN GSIHLQSKPE VGSQAQAGNA IKLTETLPAH SVIGRDQEST QADPSEPPGP 360 SDSEEAGDAA VQEEERGDDE PNPKRRQVDV VTSEATLPHK TVTEPKIIVQ TRSEVDLLDD 420 GYRWRKYGQK VVKGNPHPRS YYKCTSAGCN VRKHVERAAA DPKAVVTTYE GKHNHDVPAA 480 RNSSHNTANT SASQVKPQKV VTEKHPLHKG MEFGNNDQRP VLLQLKEEKI AV*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |