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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Potri.017G086300.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
MYB |
| Protein Properties |
Length: 446aa MW: 48917.7 Da PI: 7.0651 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.017G086300.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 56 | 9.3e-18 | 58 | 105 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl
Potri.017G086300.1 58 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 105
79********************************************97 PP
|
| 2 | Myb_DNA-binding | 52.6 | 1.1e-16 | 111 | 156 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l
Potri.017G086300.1 111 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 156
89********************.*********.************996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 446 aa
Download sequence Send
to blast |
MMIIFCLRFI LVTTLNKSNS FLVLYKEPKE LPSFFADHFT KQVTMGRSPC CDKVGLKKGP 60
WTPEEDQKLL AYIEEHGHGS WRALPAKAGL QRCGKSCRLR WTNYLRPDIK RGKFSLQEEQ 120
TIIQLHALLG NRWSAIATHL PKRTDNEIKN YWNTHLKKRL AKMGIDPVTH KSKNDALLSI 180
DGQSKNAANL SHMAQWESAR LEAEARLVRE SKLRSQSIQH QLSSTTPGYF PGSGSSPGST 240
SSTLAQPPRS LDALKAWNDG WSKSSEGNGG GLNMGIGDVL ESPTSTLTFS ENAPPVMNSG 300
AVGENSISMI EFVGTSGSTE TGIIKEEGEH DWKSLSNSSH LPDNSVSLTS TLHDMTISME 360
APWNPDSLRA NCDNVHVGKN VMEEGFTHLL LSDSAERSLS DDGKDSDHSG GSGSGSGSNY 420
YEDNKNYWNS ILNLVNSSPS NSPMF*
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| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in trichomes, stems, carpels, petals and stamens. {ECO:0000269|PubMed:18805951}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}. |
