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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.017G079500.1 |
Common Name | POPTR_0017s11570g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 539aa MW: 58360.2 Da PI: 6.6957 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.017G079500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.3 | 8.5e-30 | 207 | 266 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+aed++++++tYeg+Hnh+
Potri.017G079500.1 207 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApLCPVRKQVQRCAEDTSILITTYEGTHNHP 266
58***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006952 | Biological Process | defense response |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 539 aa
Download sequence Send
to blast |
MSSSGGAAIE ERAVQFGLTS REDSGSSQEA KKEEVIESAK SEMGDVREEN HRLKMMLERI 60 EKDYQSLQLR FFDILQHETS SKQSTDSAPS HDETEESNEL VSLCLGRSPS EPKKEEKSTN 120 SAKSRENEEL KANLSLGLDS KILTSTETAS NPSPAESVEE PKEEAGETWP PSKIIPKRNG 180 DHDEAAQQSQ AKRARVCVRT RCETPTMNDG CQWRKYGQKI SKGNPCPRAY YRCTVAPLCP 240 VRKQVQRCAE DTSILITTYE GTHNHPLPVS ATAMASTTSA AASMLLSGSS TSQQGLGSHI 300 NATSARTELN GVSFSLHDHL RAKQIYFPNS SSPTFPTITL DLTTSPSTST TPFGRFSSSF 360 SSTSRYPSTS LNFSSTEPNS LPPIWGNGLH NYGTRSYNHQ QLYQSFMEKN HQAAASQQVL 420 TDTLTKAITS DPSFRTVIAT AISSMIGGGG SAIANNRNQR AGDQNCFGQN LNFGETMTTS 480 AFSINSLSQN GKGCASSCFN GLSSSTSQKG SSQLQPALPF SVFNSASMPN NDNEEHKS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |