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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Potri.017G041500.1 |
| Common Name | POPTR_0017s06900g |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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| Family |
GRAS |
| Protein Properties |
Length: 449aa MW: 50283.4 Da PI: 5.4346 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.017G041500.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 281.1 | 3.2e-86 | 44 | 441 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
++lLl+cA a++++d +l+q++++ l++ as gdp+qRl++ f++AL +r ++ +++ ++ +s+ +++++s + l +++++ P+++
Potri.017G041500.1 44 EKLLLHCASALEHNDGTLVQQVMWVLNNVASLVGDPNQRLTSWFLRALVSRASKVCPTAMDFDGSSTIRRRQMSVT--ELAVYVDLIPWHR 132
689***************************************************9999998777777765554444..33469******** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnv 180
f++ + N+aI +a+eg ++vHi+Df+i++++QWp+L++aLa+RpegppslRiT+ + ++ + + ee+g rL++fA+ +vpfefnv
Potri.017G041500.1 133 FGFCASNSAIFKAIEGYSKVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVPSCRPPVppfLNVSCEEVGLRLSNFAKFRDVPFEFNV 223
*****************************************************97775555668999************************ PP
GRAS 181 l.....................vakrledleleeLrvkpgEalaVnlvlqlhrll.....desvsleserdevLklvkslsPkvvvvveqe 245
+ ++ l+ l+++ L+++ +Eal++n++ l +l +sv+ +s rd++L++vk +P +v+vv+++
Potri.017G041500.1 224 IddpsylasteimpkesshdfhFESLLNHLTPSVLNLRDDEALVINCQNWLRYLSnieqqGSSVQYSSLRDAFLRTVKAFNPCIVIVVDED 314
***********998888777755556778899999*************999988755444566777779********************** PP
GRAS 246 adhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakq 336
+d++++s+ r++ +++y + fd+le+ lp++s++ri +E +g +i+n+++ eg +r+er e k +er+++aGF +vp+ e++ +
Potri.017G041500.1 315 SDLSAPSLSSRITTCFNYLWIPFDALETFLPKDSSQRIEYESD-IGHKIENIISFEGLQRIERLEPGIKVSERMKNAGFFSVPFCEDTIGE 404
*******************************************.*********************************************** PP
GRAS 337 aklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
+++ll++++ ++g++ e++ l+l+Wk+++ v+++aW
Potri.017G041500.1 405 VRSLLEEHAsGWGMKR-GEDHMLMLTWKGHNSVFATAW 441
*********5555543.4567889************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 449 aa
Download sequence Send
to blast |
MKTELRGNTT SISLQNPSLF NTPQSSLSGA LKGCLGSLDG ACIEKLLLHC ASALEHNDGT 60
LVQQVMWVLN NVASLVGDPN QRLTSWFLRA LVSRASKVCP TAMDFDGSST IRRRQMSVTE 120
LAVYVDLIPW HRFGFCASNS AIFKAIEGYS KVHILDFSIT HCMQWPTLID ALAKRPEGPP 180
SLRITVPSCR PPVPPFLNVS CEEVGLRLSN FAKFRDVPFE FNVIDDPSYL ASTEIMPKES 240
SHDFHFESLL NHLTPSVLNL RDDEALVINC QNWLRYLSNI EQQGSSVQYS SLRDAFLRTV 300
KAFNPCIVIV VDEDSDLSAP SLSSRITTCF NYLWIPFDAL ETFLPKDSSQ RIEYESDIGH 360
KIENIISFEG LQRIERLEPG IKVSERMKNA GFFSVPFCED TIGEVRSLLE EHASGWGMKR 420
GEDHMLMLTW KGHNSVFATA WVPIDLQD*
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