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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.016G121700.1 |
Common Name | POPTR_0016s12930g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bZIP |
Protein Properties |
Length: 176aa MW: 20373.4 Da PI: 10.1392 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.016G121700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 29.6 | 1.5e-09 | 74 | 108 | 3 | 37 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvke 37
++kr +r + NR++A+rsR+RK+ ++e+Le+ vk+
Potri.016G121700.1 74 KSKRIKRIMANRLSAQRSRLRKLVYVEKLERDVKA 108
68*****************************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MLNPKRSHSA SYFDMEANSR PRVPLLLGSA RDSFAFLKEP CFVKSGTGSC TVAEQQNDTQ 60 GKRRHDNALD SELKSKRIKR IMANRLSAQR SRLRKLVYVE KLERDVKAEE VKVYWLSLQE 120 SLYQQSQMAL QTENTHIKEI MEGLEREKAM KEVEFQYLKK ELQALRGASM RLLYN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC216544 | 6e-74 | AC216544.1 Populus trichocarpa clone POP016-D10, complete sequence. |