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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Potri.016G101400.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
C2H2 |
| Protein Properties |
Length: 322aa MW: 36836.2 Da PI: 7.8762 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.016G101400.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.4 | 0.00023 | 55 | 77 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C + F++ L H+++H
Potri.016G101400.1 55 YSCSFCRREFRSAQALGGHMNVH 77
99*******************99 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MEQARYWMLT KRKHSLDSHF QASTNPSLDD SWEEQAFAED AAGPLGGCIW PPRSYSCSFC 60
RREFRSAQAL GGHMNVHRRD RARLKQSPSP HNEILHHEHQ KPLNHLQNPY TSFGFQYPSQ 120
LCTLDYCPNP NSNPGFIPSR TSSSRVSITS TQENFCDKTI SPPFTSFIVE EQQKRSHKSS 180
PPPQTKLTKE RCHISSLSTE GEQNSRKIES GCRAKVDYVQ TDLSVSLNLV VRRTRPSISD 240
CGEEPMSCKK RRIDKSSLPF FLKCNSVDKH HVQSEVFEIS PCTVDELDLE LRLGDRPKKY 300
LGKSIEPPFD FKDISEETER SE
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