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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.015G105800.1 |
Common Name | POPTR_0015s11710g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
Trihelix |
Protein Properties |
Length: 300aa MW: 34823.9 Da PI: 7.3759 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.015G105800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 71.9 | 1.1e-22 | 38 | 132 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82
rWt+qe+ +Lie ++ +e+r++ ++ +++ +W++vs++++++g++r+p+qC+++w n+ ++kkik++e+++ +e++s + +
Potri.015G105800.1 38 RWTRQETFVLIESKKVVENRFQWSRrstsalgsdQIESKWDSVSSYCSQHGVNRGPVQCRKRWGNMLCDFKKIKTWESQQMNETESFWMMR 128
8*********************653345566666**********************************************99999999999 PP
trihelix 83 dqle 86
++l+
Potri.015G105800.1 129 NELR 132
9986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MVSESNDGQE TQELSRPNGV RKEQALDVDD KTKTRHPRWT RQETFVLIES KKVVENRFQW 60 SRRSTSALGS DQIESKWDSV SSYCSQHGVN RGPVQCRKRW GNMLCDFKKI KTWESQQMNE 120 TESFWMMRNE LRRERKLPSF FDKEVYYVLD GRVITTDAIP LSQITFKKQM DCIDRDEAAT 180 AEEEEEEHEY TEANLDSSQC ARAEDGTTKK QNLGTKTRKG SMSREGKKRR LSSDESEDPD 240 LEDRLIKVLG RNMSMLNSQL KAQNINCQLD REQRKDHNDS LVRALNKLTD AIVKIADKL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |