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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.014G119800.1 |
Common Name | POPTR_0014s11490g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 263aa MW: 29899.1 Da PI: 5.1105 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G119800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 95.2 | 4.7e-30 | 52 | 110 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d +v+++tY+++Hnh+
Potri.014G119800.1 52 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDASVLIVTYTSNHNHP 110
699***********************9988****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MDSSPSRKLD SNVSELTPET QTSKRRKMVE KIVVRVRIGE NAVKLKNEGP PSDFWSWRKY 60 GQKPIKGSPY PRGYYRCSTS KGCSAKKQVE RCRTDASVLI VTYTSNHNHP GPDLHDSNVN 120 QQPRDPETPP TDLVDHPITP KQEKPEEETG ERHDHPIMPS TDEDVSEGHN FHYLESPIRI 180 PQDIMISQDY PFTENSEKSH DTLGIVFDEE PICCSRLMTF SAPKSEENND FFDELEELPT 240 SSSFTSFVRG NFFDERIPVV PS*
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