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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.014G099700.1 |
Common Name | POPTR_0014s09520g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bHLH |
Protein Properties |
Length: 620aa MW: 68046.2 Da PI: 6.5728 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G099700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 40.7 | 4.1e-13 | 450 | 496 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq
Potri.014G099700.1 450 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYINELQ 496
799***********************66......******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 620 aa
Download sequence Send
to blast |
MKIELGVGGG AWNDEDKTMV AAVLGTKAFN YLLSNSVANQ NLLMAMCGDE SLQNKLSDLV 60 DRPNASNFSW NYAIFWQISC SKSGDWVLGW GDGSCREPKE GEESEVTRIL NIRHEDETQQ 120 RMRKRVIQKL QTLFGESDED NYALGLDQVT DTEMFFLASM YFSFPHGEGG PGKCYASGKH 180 MWISDALKPG PDYCVRSFLA KSAGFQTIVL VATDVGVVEL GSVRSVPESI EMVQSIRSWF 240 STRNSSIRAK PMAAAAAAAA AMPAVSEKKD ENSPFSNFGI VERVGVPKIF GQDLNSNHGH 300 GHGFREKLVV RKMEERPSWN AYQNGTRLAL PGAQNGLHGS GWAQSFGMKQ GTPSDVYGSQ 360 ATANNLQELV NGVREEFRLN HYQPQKQVQM QIDFSGASSG PSVIGKPLSA ESEHSDVEAS 420 CKEERPGTAD DRKPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNISKMD 480 KASLLGDAIS YINELQTKLK VMEAEREKSG SISRDASALD ANTNGESHNQ APDVDIQASH 540 DELMVRVSCP LDSHPASRVI QAFKEAQITV VESKLSAAND TVFHTFVIKS QGSEQLTKEK 600 LMAAFSRESS SLHSLSSTG*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 3e-29 | 444 | 506 | 2 | 64 | Transcription factor MYC2 |
5gnj_B | 3e-29 | 444 | 506 | 2 | 64 | Transcription factor MYC2 |
5gnj_E | 3e-29 | 444 | 506 | 2 | 64 | Transcription factor MYC2 |
5gnj_F | 3e-29 | 444 | 506 | 2 | 64 | Transcription factor MYC2 |
5gnj_G | 3e-29 | 444 | 506 | 2 | 64 | Transcription factor MYC2 |
5gnj_I | 3e-29 | 444 | 506 | 2 | 64 | Transcription factor MYC2 |
5gnj_M | 3e-29 | 444 | 506 | 2 | 64 | Transcription factor MYC2 |
5gnj_N | 3e-29 | 444 | 506 | 2 | 64 | Transcription factor MYC2 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 431 | 439 | RKPRKRGRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}. |