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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.014G079300.1 |
Common Name | POPTR_0014s07520g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
MYB |
Protein Properties |
Length: 542aa MW: 60793.1 Da PI: 9.0002 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G079300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 58.5 | 1.5e-18 | 48 | 93 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
++WT eEd++l+davk++ +++Wk+Ia++++ Rt+ qc +rwqk+l
Potri.014G079300.1 48 KKWTGEEDKILADAVKRYNSKNWKKIAECVP-DRTDVQCLHRWQKVL 93
69*****************************.************986 PP
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2 | Myb_DNA-binding | 53.7 | 4.7e-17 | 99 | 145 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+W +eEd+l+ ++v+++G++ W+ +a+++ gR +kqc++rw+++l
Potri.014G079300.1 99 KGPWKKEEDDLIRELVEKHGNKKWSQVAKHLT-GRIGKQCRERWHNHL 145
79*****************************9.*************97 PP
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3 | Myb_DNA-binding | 50.9 | 3.5e-16 | 151 | 193 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
r +WT+eE+ +l++a+ +G++ W+ Ia+ + gRt++++k++w+
Potri.014G079300.1 151 RTPWTKEEEAILIKAHGAYGNK-WAEIAKLLH-GRTENSIKNHWN 193
789*******************.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 542 aa
Download sequence Send
to blast |
MVEEVKEINS NSKTKGLVYW TGLVPHGGIR NAIQNQQGRM TGPTRRSKKW TGEEDKILAD 60 AVKRYNSKNW KKIAECVPDR TDVQCLHRWQ KVLDPKLVKG PWKKEEDDLI RELVEKHGNK 120 KWSQVAKHLT GRIGKQCRER WHNHLNPDIN RTPWTKEEEA ILIKAHGAYG NKWAEIAKLL 180 HGRTENSIKN HWNCSVRKRI ESYPARGLDF YSYKTKADGK KLEVGKQRND RGVNLCSNVE 240 PCSLDLVLGN VGRREGQLKT SDNEICKEWN DSAKSTGRTI GTKATDTCVL SSQDCRESAS 300 SAYTSESTDH SSVNQPGKIC DISFGSLMRS PYSQERTHET TNTINSLPSE ALSPSLDLSL 360 STPFSAHGYD ETMDEHEKNR GAGGPNTTDK LHRGLCYESL QLKDLNVFLE TGSFPSSDCY 420 IRTVGGPGSF STPISRNRVS PDCSSPESRL RSKARSFKST PSIIRKRSSI TLRQAGSSDK 480 DDNGLRSLGS CSSDKDDDDD DVDLLNKKQL FLSPPKSKKL ETPEEMKSVE KRLEYAFNIE 540 G*
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