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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.014G078500.1 |
Common Name | POPTR_0014s07450g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
TCP |
Protein Properties |
Length: 397aa MW: 42919.2 Da PI: 10.1254 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G078500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 121.4 | 1e-37 | 127 | 230 | 2 | 106 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaa 91
++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ + + + +s++a+
Potri.014G078500.1 127 PPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsV--NGTLKIPTTTSSSAE 215
6899************************************************************8888855531..222222222222333 PP
TCP 92 ksaakskksqksaas 106
+++++ kk++k++a+
Potri.014G078500.1 216 PDEPNAKKKRKRPAN 230
333333333332222 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MGPTIYHHLL CPTLFGDWQV QTLLCIDPSI LTFFFGFLFF FLSDRPLLVA PVQKQELGED 60 ASMTTADLRI NSGELRNIRG GPTNKKNYND MSAAPKEEPC TEDRSPTPPL AVVPFAAIPM 120 PLTTVTPPKR ASTKDRHTKV EGRGRRIRMP ATCAARIFQL TRELGHKSDG ETIRWLLEHA 180 EPAIIAATGT GTVPAIAMSV NGTLKIPTTT SSSAEPDEPN AKKKRKRPAN SEYVDVNDSV 240 SVSASLAPIT TRPRQPPQPQ AQQPVAAVPQ GLVPMWAIPS NTVVPGAFFM VPSMPGPFNQ 300 PQIFTFPAAA SPLINISPRP ISSFVSSMQS NIAVALPVSG SKPGKGISRT APSSSSAHTI 360 RTPSTTTNST PHMLRDFSLE IYDKQELQFM SRSSKQ*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in archespores, pollen mother cell, ovule primordia and megaspore mother cells. {ECO:0000269|PubMed:25527103}. |