 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Potri.014G076000.2 |
| Common Name | POPTR_0014s07210g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
NAC |
| Protein Properties |
Length: 202aa MW: 23022.9 Da PI: 7.1259 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.014G076000.2 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 137.9 | 6.4e-43 | 12 | 140 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
p+G+ FhPtdeel++++Lk k+ g ++ +i+ev+++++ePw+Lp ++++++++ wyfFs+r+ ky++ k+++r+tk+gyWk tg+d+
Potri.014G076000.2 12 PKGYGFHPTDEELINHFLKLKMMGGYDHEVAIIAEVNVCNSEPWELPglSEIQSNDTVWYFFSPRNYKYSNRKQAKRTTKAGYWKLTGNDR 102
89*********************999888799***************6449999999********************************** PP
NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
+ + +ge++ kk+Lvfykgr p+ ++t+W+mhey+
Potri.014G076000.2 103 IIRVLsTGEEIAKKKSLVFYKGRVPNIVRTNWIMHEYN 140
9877658999***************************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 202 aa
Download sequence Send
to blast |
MTSSTVPFPS APKGYGFHPT DEELINHFLK LKMMGGYDHE VAIIAEVNVC NSEPWELPGL 60
SEIQSNDTVW YFFSPRNYKY SNRKQAKRTT KAGYWKLTGN DRIIRVLSTG EEIAKKKSLV 120
FYKGRVPNIV RTNWIMHEYN PTFNFHNQKD FVLCKLKKNS DDKLTCEEGG SSSNMASDFP 180
NNVTEEDHLE AFLGVDGGYY N*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-35 | 10 | 160 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-35 | 10 | 160 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-35 | 10 | 160 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-35 | 10 | 160 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 9e-35 | 10 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 9e-35 | 10 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 9e-35 | 10 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 9e-35 | 10 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 9e-35 | 10 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 9e-35 | 10 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 9e-35 | 10 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 9e-35 | 10 | 160 | 19 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 8e-35 | 10 | 160 | 16 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 8e-35 | 10 | 160 | 16 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
