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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.014G066500.1 |
Common Name | POPTR_0014s06190g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bHLH |
Protein Properties |
Length: 472aa MW: 51139.8 Da PI: 8.2251 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G066500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 49.4 | 8e-16 | 297 | 342 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq
Potri.014G066500.1 297 HNQSERKRRDKINQRMKTLQKLVPSS-----SKTDKASMLDEVIEYLKQLQ 342
9************************8.....6******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
GO:0009506 | Cellular Component | plasmodesma |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 472 aa
Download sequence Send
to blast |
MSHQCVPSWE VDDNRTTAPK LSLRFHSNSS APDMPMLDYE VAELTWENGQ IAMHGLGPPR 60 VPAKPIASTS PSKYTWDKPR ASGTLESIVN QATCVPQCNK ATFDNSTGSD HDLIPWFNHH 120 KASASATMTM DALVPCSNRS DQGRTTHVID SGPAGLGTCV VGCSTRVGSC SAPAATQDED 180 GLLTGKRARV ARVPVPPEWS RDQSVNHSAT FGKKDSQQMT VDSCEREFGV GFTSTSFGSQ 240 ENTSSGTNPC TKTLTADEND SVCHSRPQRE AGKEDDKKKG NGKSSVSTKR SRAAAIHNQS 300 ERKRRDKINQ RMKTLQKLVP SSSKTDKASM LDEVIEYLKQ LQAQVQMMSR MNMQPMMLPL 360 ALQQQLQMSM MAPMSIGMAG MGMGMGVMDM NTIAARSNMT GIPPALHPTA FIPLTTWDGS 420 SGHDRLQTTA ADPMSAFLAC QTQPMTMDAY SRMAAMYQQL HQQPPASNSK G*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 300 | 305 | ERKRRD |
2 | 301 | 306 | RKRRDK |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in stems and flowers. {ECO:0000269|PubMed:12679534}. |
Functional Description ? help
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Source |
Description |
UniProt | Required during the fertilization of ovules by pollen. {ECO:0000269|PubMed:15634699}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold treatment. {ECO:0000269|PubMed:12679534}. |