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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.014G055700.1 |
Common Name | TINYL9 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 270aa MW: 29786.9 Da PI: 5.0814 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G055700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.4 | 8.8e-19 | 90 | 139 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr ++ +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+++++g
Potri.014G055700.1 90 TYRGVRMRS-WGKWVCEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKG 139
69****998.**********843...6**********************99887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 270 aa
Download sequence Send
to blast |
MEKHIILEID AQDNSLTSSS TSTTTTTTTT SSSSSSFSTT ISYTDRISKK EENSIADLKG 60 SRKSQELQSG NEGNKKRKTT RNENNGKHPT YRGVRMRSWG KWVCEIREPR KKSRIWLGTY 120 PTAEMAARAH DVAALAIKGG SAYLNFPELV DELPRPLSKS PKDIQAAAAK AAAASFPETR 180 HCEAEAEAEA DMSHAELNVS NLSDNLAMDN IQESSSSPST DVDDKLFDLP DLFIDGVNHS 240 DGFCYYSPPW QLCSADTGFR LEEPFLWEY*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF155928 | 0.0 | EF155928.1 Populus trichocarpa TINY-like protein (TINYL9) gene, complete cds. |