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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.014G051200.1 |
Common Name | POPTR_0014s05010g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
Trihelix |
Protein Properties |
Length: 344aa MW: 38131.6 Da PI: 10.6293 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G051200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 68.8 | 1e-21 | 45 | 135 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86
+Wt +e+ aLi+a+r+++ +lrrg+lk+++W+ev++++ + ++++qC++k+e+l+kry+ + +++++ s+ s++++f++++
Potri.014G051200.1 45 CWTPDETVALIDAYRDKWYTLRRGNLKANHWQEVADAVarrcPAASPPKTAVQCRHKMEKLRKRYRTEIQRARSMpVSRFASSWVHFKRMD 135
8**********************************99966556667799*************************9779999*********7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MSTPPNTGSP SPPQDLTPLQ ITALQALPAP PTQPSTNPRR LPPPCWTPDE TVALIDAYRD 60 KWYTLRRGNL KANHWQEVAD AVARRCPAAS PPKTAVQCRH KMEKLRKRYR TEIQRARSMP 120 VSRFASSWVH FKRMDGMEKG PQAKADYNSE SEENYRTAGN VMNTRSIQKL YRNGMGNPGT 180 GSGNNGLSGG NSSSGNAGGF RIRIPTGVSI AQPGPKFYAK PEQKYGGGPS MGVNASPNPN 240 LKPNYGGMGS SSRVMRGGEE MGKKREREPM EELVAAIKVL GDGFVRMEQM KMEMAREMET 300 MRMEMEMKRT EMILESQQRI VEAFAKALSE KKKRPKRMPS PES*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU277194 | 1e-151 | GU277194.1 Populus balsamifera isolate HAY07 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277196 | 1e-151 | GU277196.1 Populus balsamifera isolate INU03 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277198 | 1e-151 | GU277198.1 Populus balsamifera isolate KUU07 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277200 | 1e-151 | GU277200.1 Populus balsamifera isolate LOV02 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277202 | 1e-151 | GU277202.1 Populus balsamifera isolate MGR10 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277204 | 1e-151 | GU277204.1 Populus balsamifera isolate NWL07 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277206 | 1e-151 | GU277206.1 Populus balsamifera isolate STO11 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277216 | 1e-151 | GU277216.1 Populus balsamifera isolate RNA13 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277217 | 1e-151 | GU277217.1 Populus balsamifera isolate RNA13 haplotype B unknown protein gene, partial sequence. |
GenBank | GU277218 | 1e-151 | GU277218.1 Populus balsamifera isolate POR11 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277219 | 1e-151 | GU277219.1 Populus balsamifera isolate POR11 haplotype B unknown protein gene, partial sequence. |
GenBank | GU277220 | 1e-151 | GU277220.1 Populus balsamifera isolate STL13 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277221 | 1e-151 | GU277221.1 Populus balsamifera isolate STL13 haplotype B unknown protein gene, partial sequence. |
GenBank | GU277222 | 1e-151 | GU277222.1 Populus balsamifera isolate WHR03 haplotype A unknown protein gene, partial sequence. |
GenBank | GU277223 | 1e-151 | GU277223.1 Populus balsamifera isolate WHR03 haplotype B unknown protein gene, partial sequence. |