|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.014G024200.5 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
Family |
WRKY |
Protein Properties |
Length: 368aa MW: 40469.1 Da PI: 10.1355 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G024200.5 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 31.5 | 3.6e-10 | 289 | 308 | 3 | 22 |
-SS-EEEEEEE--TT-SS-E CS
WRKY 3 DgynWrKYGqKevkgsefpr 22
D y+WrKYGqK++kgs++pr
Potri.014G024200.5 289 DDYSWRKYGQKPIKGSPHPR 308
99*****************9 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MAVELMMGYS GDSFATKMQE NDVREAATAG IQSVEEVIKL LKQNQLEQQQ KQQYYQELSA 60 ASSSSNLGTD NIMAVTDMAV NNFKKVISLL GRTTRTGHAR FRRAPVACPP QQQIQEPEPG 120 PQQQKQQVQE PVPYVRAINS QPTEQGSAFR VYQPTPIHRL PPLPHNQQQK TLLVTKNGLS 180 DRNEMATTIN FANSPTISAP SFLSSLTGET DSFQCSKSSG FQFTQPSAGK PPLSSSSLKR 240 KCNSMDDAAL KCGSSSSRCH CSKKSRKSRI KRVVRVPAIS SKMADIPPDD YSWRKYGQKP 300 IKGSPHPRYP KVAFFVSLVL NTFWVLSVLQ CSFHVSIYTW IAVGKSKNST LIPFVSTCLG 360 DTTSAVA*
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | GQ377434 | 0.0 | GQ377434.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 14 mRNA, complete cds. |