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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.014G024200.1 |
Common Name | POPTR_0014s02420g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 389aa MW: 42938.6 Da PI: 9.7644 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.014G024200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.6 | 8.4e-31 | 316 | 373 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +d ++++tYegeHnh+
Potri.014G024200.1 316 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDSMMLIVTYEGEHNHS 373
99************************988****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MPLAFERGKV NQSIERKRDS VLDGVKDMAV ELMMGYSGDS FATKMQENDV REAATAGIQS 60 VEEVIKLLKQ NQLEQQQKQQ YYQELSAASS SSNLGTDNIM AVTDMAVNNF KKVISLLGRT 120 TRTGHARFRR APVACPPQQQ IQEPEPGPQQ QKQQVQEPVP YVRAINSQPT EQGSAFRVYQ 180 PTPIHRLPPL PHNQQQKTLL VTKNGLSDRN EMATTINFAN SPTISAPSFL SSLTGETDSF 240 QCSKSSGFQF TQPSAGKPPL SSSSLKRKCN SMDDAALKCG SSSSRCHCSK KSRKSRIKRV 300 VRVPAISSKM ADIPPDDYSW RKYGQKPIKG SPHPRGYYKC SSVRGCPARK HVERALDDSM 360 MLIVTYEGEH NHSHPIDEAP GALVLESS*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GQ377434 | 0.0 | GQ377434.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 14 mRNA, complete cds. |