 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Potri.014G017400.1 |
| Common Name | POPTR_0014s01770g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
LBD |
| Protein Properties |
Length: 209aa MW: 22465.4 Da PI: 7.3401 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.014G017400.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 96.7 | 2.4e-30 | 2 | 105 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
+C++C+vlr++C++ Cvl+ ++ p++q +++ +++k+FG+s +++l++a+pe++r+ +++sl++eA+ r+ +Pv+Gavg++++++++
Potri.014G017400.1 2 SCNGCRVLRKGCSETCVLRSCLhwiptPEAQGNATLFLAKFFGRSDLISLISAVPESQRPVLFQSLLFEACGRTVNPVNGAVGLLWSGNWH 92
6************************9999************************************************************** PP
DUF260 87 leqlkaelallke 99
++q+++e +l++e
Potri.014G017400.1 93 VCQAAVESVLAGE 105
******9998876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 209 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSETCVLR SCLHWIPTPE AQGNATLFLA KFFGRSDLIS LISAVPESQR 60
PVLFQSLLFE ACGRTVNPVN GAVGLLWSGN WHVCQAAVES VLAGETLRPL PGILTGVLAP 120
NCDESSDSFS AAAYAVHSMT WNQSKPFDKE NNNQVVSDHH VNLCLARGRG GRDKRGRDAV 180
SFYTGGESET TSFESSGADK NKLLNLFV*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |
