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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.013G158500.1 |
Common Name | POPTR_0013s15440g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 332aa MW: 37103.5 Da PI: 5.0713 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.013G158500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.3 | 6.1e-21 | 132 | 182 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W AeIrdp+ r kr++lg+f+taeeAa +++a++kl+g
Potri.013G158500.1 132 KKFRGVRQRP-WGKWSAEIRDPT----RrKRVWLGTFDTAEEAATVYDRAALKLKG 182
59********.**********84....34*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MHLLFPNELQ PMFTSNATMS VQPKVKFTEH VFITSKLIEN QQLHPSSRTR QRLVRIIHTD 60 PDATDSSSDE EEEEQERKYV KRVKRQVSEI SLLEQETTAP AAPSSTTSND DQEPRRKRPS 120 SRLPLPDVSR QKKFRGVRQR PWGKWSAEIR DPTRRKRVWL GTFDTAEEAA TVYDRAALKL 180 KGPDAVTNFP TNSVITEKAH VNSGSSDVKC ESRESPSIRG TANVMASPAL VLRYVDLTPS 240 DAVLTEKAKV VDGQRESCES PLSGVHDMSS PTSVLPYEEL SPFDSLGYGD VDAFGFEIDV 300 PLSLPNSMLS GNFFDKEEFV DLDDFLVDAI C*
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