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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Potri.013G123100.1 |
| Common Name | POPTR_0013s12690g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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| Family |
VOZ |
| Protein Properties |
Length: 448aa MW: 49996.5 Da PI: 5.67 |
| Description |
VOZ family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.013G123100.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | VOZ | 438.9 | 6.3e-135 | 211 | 427 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwn 91
pppsaf+gpkcalwdctrpaq +ewl+dycssfhatlalneg+pg++pvlrp+gi+lkd+llf+al ak+qgk+vgip+cegaa +kspwn
Potri.013G123100.1 211 PPPSAFMGPKCALWDCTRPAQVAEWLEDYCSSFHATLALNEGPPGMAPVLRPRGINLKDNLLFDALIAKMQGKNVGIPQCEGAAVMKSPWN 301
89***************************************************************************************** PP
VOZ 92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalal 182
aaelfdlsll+getirewlffdkprraf+sgnrkqrslpdy+grgwhesrkqvmke+gg+k+syymdpqp++++ewhl+eyein++d +al
Potri.013G123100.1 302 AAELFDLSLLDGETIREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKELGGQKKSYYMDPQPPGCHEWHLFEYEINKCDLCAL 392
******************************************************************************************* PP
VOZ 183 yrlelklvdekksakgkvskdsladlqkklgrlta 217
yrlelkl+++k+s+kgkvskd+ladlqkk+grlta
Potri.013G123100.1 393 YRLELKLTNGKRSPKGKVSKDPLADLQKKMGRLTA 427
*********************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 448 aa
Download sequence Send
to blast |
MQKGKKSKCT SVSHHLLMDN AKTRLNDLHE RFSNLQAARK EGWNSDVAVL EEQVYQGLRE 60
WKAELDVPSP ANSLLDISLG SFSDDIGRLL QLYEEEDDAT SPLTMQLVLK PEMQPEPNFQ 120
NLNPGNLTTF QHEYLVNSHG QGLGFQGFHQ PNSSASGLQN VVVSAPDITT LLDCQQFTLD 180
EEFDPGLFGG TNDIEECGKN AESNNLQYIS PPPSAFMGPK CALWDCTRPA QVAEWLEDYC 240
SSFHATLALN EGPPGMAPVL RPRGINLKDN LLFDALIAKM QGKNVGIPQC EGAAVMKSPW 300
NAAELFDLSL LDGETIREWL FFDKPRRAFD SGNRKQRSLP DYNGRGWHES RKQVMKELGG 360
QKKSYYMDPQ PPGCHEWHLF EYEINKCDLC ALYRLELKLT NGKRSPKGKV SKDPLADLQK 420
KMGRLTAVVT ADNGPPLKGK TKADREN*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC213156 | 0.0 | AC213156.1 Populus trichocarpa clone POP076-I18, complete sequence. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Yasui Y,Kohchi T
VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
[PMID:25351333] - Kumar S,Choudhary P,Gupta M,Nath U
VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
Plant Physiol., 2018. 176(4): p. 2917-2930
[PMID:29507119] - Song C,Lee J,Kim T,Hong JC,Lim CO
VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
Planta, 2018. 247(6): p. 1439-1448
[PMID:29536220]
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