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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.013G048000.1 |
Common Name | POPTR_0013s04530g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
G2-like |
Protein Properties |
Length: 432aa MW: 48374.3 Da PI: 5.4812 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.013G048000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 109.1 | 2.3e-34 | 202 | 256 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l++m+v+gLt++hvkSHLQkYR+
Potri.013G048000.1 202 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKHMNVEGLTIYHVKSHLQKYRS 256
79****************************************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 432 aa
Download sequence Send
to blast |
MMRNSASQQA SSLSPGNRSV GPLFSSSSRF SNDMHVSSVS PQGRQSHNSP FISQSLRDRG 60 NFTPTHDSHS EVQSTEFIAY SDENKDLSWP VDPLQDLLDF AGNVHVQNGQ VESSAGVFAS 120 EDHAKRTDWQ EWADQLISVD DELEPNWSEI LNDVNKTDSR QKELKPSPNI SVKQPPIHQH 180 QTAHSGEVCA VANPLSAAPT TKPRMRWTPE LHEAFVEAVN QLGGSERATP KGVLKHMNVE 240 GLTIYHVKSH LQKYRSARYK PESSDEKKTS PIEEMKSLDL KTSMGITEAL RLQMEVQKRL 300 HEQLEIQRNL QLRIEEQGRH LQEMFEKQRK IEDDKSKAPS SSQDDPSPLQ AKLEQSSANY 360 KLEASELDLV KTSNESALLE ESSQSISRKQ KAPEERNDQV LDQIDEESSP APIKRPRRDE 420 TAELSTGAAS N*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 2e-29 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-29 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-29 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-29 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-29 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-29 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-29 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-29 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in shoots and roots. {ECO:0000269|PubMed:20838596}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Bonnot C, et al.
A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana. New Phytol., 2016. 209(1): p. 161-76 [PMID:26243630] - Aleksza D,Horváth GV,Sándor G,Szabados L
Proline Accumulation Is Regulated by Transcription Factors Associated with Phosphate Starvation. Plant Physiol., 2017. 175(1): p. 555-567 [PMID:28765275]
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