|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.013G040700.4 |
Common Name | POPTR_0013s03800g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
Family |
bZIP |
Protein Properties |
Length: 214aa MW: 23364.3 Da PI: 9.99 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.013G040700.4 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 47.5 | 3.8e-15 | 11 | 60 | 9 | 58 |
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
r+ +NRe+ArrsR RK+a + eLe+ v++L eN++L k l +++++ +
Potri.013G040700.4 11 RMLSNRESARRSRSRKQAHLTELETQVAQLRVENSSLLKSLTDISQKYNE 60
99************************************999999988875 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus |
GO:0071333 | Biological Process | cellular response to glucose stimulus |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MESCGYVFFS RMLSNRESAR RSRSRKQAHL TELETQVAQL RVENSSLLKS LTDISQKYNE 60 SAVDNRVLKA DVETLRAKVK MAEETVKRFT GLNTMFHALP DISTMSMSSF DGSPSDTADA 120 AVPVKDDPKH HFYKAPNNPI TTHDSRPRGN NVLADISSVE NVQPNPVPAA GVSGNKMGRT 180 PSLQRVASLE HLQKRIRGGA SPCGPQSNGE QAK*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC237587 | 0.0 | AC237587.1 Populus trichocarpa clone POP036-C05, complete sequence. |