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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.012G032900.1 |
Common Name | POPTR_0012s01260g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 366aa MW: 41083.6 Da PI: 4.7709 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.012G032900.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.1 | 5.9e-20 | 131 | 180 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa+ +++a+ kl+g
Potri.012G032900.1 131 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAARVYDNAAIKLRG 180
89*******.**********82....35*************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0016021 | Cellular Component | integral component of membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MIDQSILCPI KYTEHKKVTK KFTKQPLKPN MVHSDDRCRS PEPSNPAPRL VRVTVTDHDA 60 TDSSSDEEGE LFGRQRVKRY VSEINIQPAA FCKETNVIAT TIAKNRKRSV GDIPQKPAKR 120 LTAQSTTNGR KFRGVRQRPW GKWAAEIRDP ARRVRLWLGT YDTAEEAARV YDNAAIKLRG 180 PDALTNFTTP PSREEDQEEE KSSPVEESEE KKPEINVETV SGSGYESADE SHSLSSPKSV 240 LTFRLPSAES HKPPSQPFQE AKMEPKHQDN EEAFGESNLS DYLPLDSPFL DDFFNFGTSG 300 PTLFDDQVIA TTTTATSIFQ ESIMCDQDFG DIFLDPLQDF TSLPSVCQED DDFFHFLNSE 360 PLTAL*
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