 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Potri.011G055600.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
Dof |
| Protein Properties |
Length: 358aa MW: 39200.8 Da PI: 8.883 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.011G055600.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 125.6 | 1.6e-39 | 61 | 120 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++
Potri.011G055600.1 61 QQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 120
7899*****************************************************976 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MIPLREEMLG NCEKMVVISS TTNAWPQNQI DEKSLMASTS KLMERPSQEV LSQPQQQQQL 60
QQALKCPRCD SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG GGCRKNKRVK 120
RPASAAEGAS NSVSSANPNP QTPIDHISST SNHINPLFYG LSGSNPSEMN LPFPGRFNPR 180
MDSAVSGYHD LQPQLNALAL GFSSGIMTTN DANGFNPTKQ IQDVVTSNSL LSSYSNLFGS 240
STTSTNTTSP TIASLLASSF NQQKFTNSGI KESTRAPNYF QSLTVPFKEL QMNGNSESGI 300
GMKGVKTEHN QNRLDWNVPC QNQIEQVGLS DPSMYWNTTT SVGSWHDPAN MGSSVLL*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KT164738 | 0.0 | KT164738.1 Populus tomentosa clone Potom.011G26508 F-box family protein 1 mRNA, complete cds. |
